PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034412-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 462aa MW: 52301.1 Da PI: 8.7623

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034412-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	40.3	1.1e-12	167	251	1	79
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkekdgkwevt 79 +fY++YA+ +GF vr ++k+++ ++e++ + ++C+k+g++++ ++k + + r+r+ +r+gC ++k ++ +++++ AUR62034412-RA 167 EFYKQYARFCGFVVRLGTEKRTQATDEVYLKYLYCNKQGFTKDGETKgrvakkkGKPKARKRTINRVGCSVTIKEEEG-IEQYRIV 251 6*****************************************999999998877777788999999999887765554.5666654 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MEDLLPYNPH PSTPFPIPPL DHAHLLSSEN FIASGNFTSF AVIEALGSAL TNKYSEGMPG 60 NRYYGGNEHI YVIENLCRSR ALECYRLNQE NGVLMFSHIL GIMEKESEEG SCSNTSTTTN 120 VAENLPSLKG PSVCYTPGGT KEFIKCCPPE LKPTIGMPFD SLLKGVEFYK QYARFCGFVV 180 RLGTEKRTQA TDEVYLKYLY CNKQGFTKDG ETKGRVAKKK GKPKARKRTI NRVGCSVTIK 240 EEEGIEQYRI VDNTRKKSYH FTYVLCSNDA SCSCRMFESV GILCRHILFV MKGKFLFEIP 300 RQYVLHRWTK EAMKKPIFGL NNNLLDGAQK DKKQKLVGDL WYRFFSCVSL CEEKVECLES 360 LLSKLISFEI EMKDLESEGP VDKREAKNKH IELFVGSNDI VVDILPPNKS SNKGSGSGKR 420 KKSDKEIAIE ESQKKDRLCR TCGQRTNHDS RNCPQKKIQI E*

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MEDLLPYNPH PSTPFPIPPL DHAHLLSSEN FIASGNFTSF AVIEALGSAL TNKYSEGMPG  60
NRYYGGNEHI YVIENLCRSR ALECYRLNQE NGVLMFSHIL GIMEKESEEG SCSNTSTTTN  120
VAENLPSLKG PSVCYTPGGT KEFIKCCPPE LKPTIGMPFD SLLKGVEFYK QYARFCGFVV  180
RLGTEKRTQA TDEVYLKYLY CNKQGFTKDG ETKGRVAKKK GKPKARKRTI NRVGCSVTIK  240
EEEGIEQYRI VDNTRKKSYH FTYVLCSNDA SCSCRMFESV GILCRHILFV MKGKFLFEIP  300
RQYVLHRWTK EAMKKPIFGL NNNLLDGAQK DKKQKLVGDL WYRFFSCVSL CEEKVECLES  360
LLSKLISFEI EMKDLESEGP VDKREAKNKH IELFVGSNDI VVDILPPNKS SNKGSGSGKR  420
KKSDKEIAIE ESQKKDRLCR TCGQRTNHDS RNCPQKKIQI E*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G19990.1	2e-12	FAR1 family protein