PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034368-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 283aa    MW: 32146.9 Da    PI: 9.9728
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034368-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.21.9e-182368147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G+ +W++Ia++++ gR++k+c++rw++ 
   AUR62034368-RA 23 RGHWRPAEDEKLRKLVEQYGPQNWNSIAEKLQ-GRSGKSCRLRWFNQ 68
                     899*****************************.***********996 PP
2Myb_DNA-binding58.71.3e-1875118146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r+++T+eE+e+l+ a++ +G++ W++I+r ++ gRt++ +k++w+ 
   AUR62034368-RA  75 RKPFTEEEEERLLTAHRIHGNK-WALISRLFP-GRTDNAVKNHWHV 118
                      789*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MMEDSGRNSS DNEMMKSSNT CPRGHWRPAE DEKLRKLVEQ YGPQNWNSIA EKLQGRSGKS  60
CRLRWFNQLD PRINRKPFTE EEEERLLTAH RIHGNKWALI SRLFPGRTDN AVKNHWHVIM  120
ARMQRERSKQ QSNKRSSLIS SSISSSTTSS THDPLSKTWK YHGTLKNNDH SRELYKFEHD  180
LNKEIKNKAS TMACLTFPRP CISKGTYRAS SSTIHPQCLL GNWLGRSNSS TNSSLFDHSN  240
GFDARQSSLQ EEALEDGGCG RAMASNTKEV NFIDFLGVGN PS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.12e-67MYB family protein