PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034195-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 636aa    MW: 70854.4 Da    PI: 8.1602
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034195-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4241.2e-1292656341373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+elL+ecA+a+s++     ++l+++ +  +s +g+p+qRl ay+ e+L ar ++s++++y+al+++e      ++ l+++++++e++P+lkf++
  AUR62034195-RA 265 LKELLIECARALSENRIDDFEKLVEQARGEVSISGQPIQRLGAYMIEGLVARRQSSGNNIYRALRCKEPL---GKDLLSYMHILYEMCPYLKFGY 356
                     5799*****************************************************************8...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea  +e+r+Hi+Df+i qG+QW++LlqaLa+Rp+g+p +RiTg+++p s+  +  +le++g+rLa + e+ ++p+ef++ v   l d
  AUR62034195-RA 357 MAANGAIAEACRNENRIHIVDFQIAQGTQWLTLLQALAARPGGAPYVRITGIDDPVSQyaRGASLEAVGKRLAALSEKYNIPVEFHA-VPVFLPD 450
                     *******************************************************9999999*************************.7999*** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ e+L+v+ gEalaVn+ lqlh+++desv+++++rd +L++vksl Pkv ++veqe+++n+++Fl+rf+eal+yysa+f+s+++++pr+ +eri
  AUR62034195-RA 451 VTREMLDVRAGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLAPKVTTLVEQESNTNTTPFLTRFTEALNYYSAMFESIDVTMPRDRKERI 545
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vE+++l+++ivnv++ceg+er+erhe ++kW++r+++aGF+++pls+++++ ++ llr ++ + y++ e++g+++lgWkdr L+s+SaW
  AUR62034195-RA 546 SVEQHCLAKDIVNVISCEGKERVERHELFGKWKSRFTMAGFQQYPLSSYVNSVIRGLLRCYS-KHYTLVEKDGAMLLGWKDRMLISASAW 634
                     **********************************************************9999.55************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 636 aa     Download sequence    
MSRPALNEAV VRLEFCKFLL LQFLAFIGIG ARRKIFYHRI SILTGNTKKG YSLCYSMDSH  60
KIVGYNVTGA DSSYISSQHT SSPIPNRIIG PLKFSFRNSP SSPFSPPFDC DTVTALSDSR  120
EQHSSSESLS GKSPSCNSSL ETTSYCQRLN SSPSEDSHQT AVLRTSSGTL FSHKTDYEVN  180
IRRVLQELET VLMGDEAVGG GSRQPQIPSQ RLGSWNREPQ GSLGAQAQSS SASGERRSEE  240
GGQSEKRHKA VEEEIQQLKI PSGNLKELLI ECARALSENR IDDFEKLVEQ ARGEVSISGQ  300
PIQRLGAYMI EGLVARRQSS GNNIYRALRC KEPLGKDLLS YMHILYEMCP YLKFGYMAAN  360
GAIAEACRNE NRIHIVDFQI AQGTQWLTLL QALAARPGGA PYVRITGIDD PVSQYARGAS  420
LEAVGKRLAA LSEKYNIPVE FHAVPVFLPD VTREMLDVRA GEALAVNFPL QLHHTPDESV  480
DVNNPRDGLL RMVKSLAPKV TTLVEQESNT NTTPFLTRFT EALNYYSAMF ESIDVTMPRD  540
RKERISVEQH CLAKDIVNVI SCEGKERVER HELFGKWKSR FTMAGFQQYP LSSYVNSVIR  600
GLLRCYSKHY TLVEKDGAML LGWKDRMLIS ASAWH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.11e-163GRAS family protein