PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034165-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YA
Protein Properties Length: 309aa    MW: 34637.6 Da    PI: 9.315
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034165-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA85.29.6e-27142197158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVN+KQy++I++RR++Rak   +++   ++ kpy+heSRh+hA+rR+Rg gGrF
  AUR62034165-RA 142 DGPIYVNPKQYHGIMRRRKMRAKEGLKNRS--TKDKPYVHESRHRHACRRARGAGGRF 197
                     57************************8887..899**********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MQKSGTNRQI SSIGSMPWWV AAGSQDEMNS SNLNQIDWIG EHQKSEHMMN GASEKEKQGV  60
FHFSFSAEDN KNSFKENNGR EHQMNSFQQF PLPQQKNYVE LGLGQPMVYA NHPLDQCHGL  120
YAVYGTQPAG RAMLPFSVAT EDGPIYVNPK QYHGIMRRRK MRAKEGLKNR STKDKPYVHE  180
SRHRHACRRA RGAGGRFLNT KNLENVKNKQ ETKKTSDQLT FLSSHSSGSE VLQSEGGNLN  240
SSKEVSDCKS PIFSGSEVTS MYYSKDFDCF GINPGRPFAF HPLQNMEGNR QGSNWVTAVD  300
GCCNLSKV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156161MRRRKM
2182191RHRHACRRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05690.15e-30NF-YA family protein