PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033941-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 315aa    MW: 35447.1 Da    PI: 6.5906
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033941-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind120.11.2e-37181122102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+++++e++e + +isw e+ nsf+++de++f++++L+kyFkhsnf+SFvRQLn+YgF+kv++ +         weF+h+ F+kgkk+ll++
  AUR62033941-RA  18 FLNKTFDMVENPESDPIISWGESFNSFIIWDEHKFSTDLLSKYFKHSNFSSFVRQLNTYGFRKVSTAHPV------RWEFAHPGFQKGKKDLLKT 106
                     9******************************************************************976......9****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     ikr+++
  AUR62033941-RA 107 IKRRAQ 112
                     ****87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEMPKPLMSL HEFGPPPFLN KTFDMVENPE SDPIISWGES FNSFIIWDEH KFSTDLLSKY  60
FKHSNFSSFV RQLNTYGFRK VSTAHPVRWE FAHPGFQKGK KDLLKTIKRR AQGNGTNSNA  120
RLLHQKETEI EILKKEQEAL KVEISDLKQQ QQNSNTCLAA MGERMKTVEW KQQEQNKVLG  180
GGEVHKKRRL VSNDNFLESF IAKHGDQFPK EEMAAAHSEL NSYLGSSAID LGSSLMPDQK  240
SNLTSETSSP DLSSGSYILW EKLMADDVIC EGNKEEAGFG VDQSKIVHEL EDLIKPRSLI  300
GYTNVGGIAC PLGH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104110LKTIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.12e-57HSF family protein