PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033931-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 310aa    MW: 34519.4 Da    PI: 8.593
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033931-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.68e-10533129
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                     +++WT eE+e l  +v+++G+g Wk+I +
   AUR62033931-RA  5 KQKWTSEEEEALRAGVAKHGPGKWKLIQK 33
                     79*************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MGNPKQKWTS EEEEALRAGV AKHGPGKWKL IQKDDKWRNM SAAVQGSRDK LRPPKPKPVQ  60
DAPAAPSVPM QAPAAPSVPV QAPTVHAPVV HESPADHVKD DFGKDLPDAK NGPRYNEMIF  120
EALEEQNGMD IGSILAHIES SQRDWEMFRG LSFTHLGRSV AVLVLYPVLY LCQKWFWSLK  180
KRSDVPVPQN FRKQLGARLR RLCSQDKLEK VDSHFRLKNN TLETNASGQK GIWARQHPPI  240
VYSKAGESVE EAAKTAAYKV VEAEYTSSIA AEAVKDLEKF LKLAEETDSV LQMAKEIFER  300
CTCGELLVA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.15e-38MYB_related family protein