PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62033603-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Trihelix

Protein Properties

Length: 417aa MW: 45933.9 Da PI: 8.2079

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62033603-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57.5	3.6e-18	42	129	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +W++ + +L++a++e+ ++l+rg+l++ +Weev+ + r + ++s +qCk+k +nl+kryk +++++++ ++s++p+f+++ea AUR62033603-RA 42 EWSDTAIECLLDAYTEKYTQLNRGNLRGRDWEEVAVIVseRCENQHKSVEQCKNKVDNLKKRYKLERHRMSSA-GVAVSHWPWFKKMEA 129 5***********************************76777889*********************97.66777******95 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MTESAEKRKE IDRDDVSEGS YKKTKTTAEI AGAGEYRKDR EEWSDTAIEC LLDAYTEKYT 60 QLNRGNLRGR DWEEVAVIVS ERCENQHKSV EQCKNKVDNL KKRYKLERHR MSSAGVAVSH 120 WPWFKKMEAI VGNSVSFKSV SDDDKVSGSS GSATRQQKRY SVGTPGSLGQ VNNMKSKSIP 180 NTKWQRVVFK ISGAALAGNG PHNIDPKVVM LIAREVTVAC RLGVQVAIVI GGRNFFCGDT 240 WITATGADRS TTYHIGMMAT VMNSVLLQSA LEKMGVQTRL QTAFAMSEVG EPYNRQKAIR 300 HLEKGRVVIF GGVGGGSGNP LFSTDTTAAL RATDLDAQAV LKGTNVDVVY DCNSSGVTFE 360 HISFREAASR GPSSMGVMAL TFCEENAIPG HMPLLRNVDG FDLPDWHMDD RLGCWDQ

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MTESAEKRKE IDRDDVSEGS YKKTKTTAEI AGAGEYRKDR EEWSDTAIEC LLDAYTEKYT  60
QLNRGNLRGR DWEEVAVIVS ERCENQHKSV EQCKNKVDNL KKRYKLERHR MSSAGVAVSH  120
WPWFKKMEAI VGNSVSFKSV SDDDKVSGSS GSATRQQKRY SVGTPGSLGQ VNNMKSKSIP  180
NTKWQRVVFK ISGAALAGNG PHNIDPKVVM LIAREVTVAC RLGVQVAIVI GGRNFFCGDT  240
WITATGADRS TTYHIGMMAT VMNSVLLQSA LEKMGVQTRL QTAFAMSEVG EPYNRQKAIR  300
HLEKGRVVIF GGVGGGSGNP LFSTDTTAAL RATDLDAQAV LKGTNVDVVY DCNSSGVTFE  360
HISFREAASR GPSSMGVMAL TFCEENAIPG HMPLLRNVDG FDLPDWHMDD RLGCWDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.2	1e-168	Trihelix family protein