PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033578-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 405aa    MW: 44279.1 Da    PI: 6.9985
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033578-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.61.5e-17227260134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  AUR62033578-RA 227 CMHCEITKTPQWRAGPLGPKTLCNACGVRYKSGR 260
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MMEEIDSGNF FDQIDDLLEF SNDDVEKGLG DNGVAINQYN NFPPVFWSDN SPGFSASHSN  60
TASDLSAELS VPYEDIVQLE WLSNFVEDSF AGSGLTVEKS RSTSYTKDSS RNQFQTSSPI  120
SVLESSSTCS RGKTLPVSHE KRARSKRPRP ATFNPRAHLI SPTSSISKTP RLLFAPSASL  180
SKSENFADSR PLKKKKKIKI LPPSGRISHN QNDNPNANTT SQALRKCMHC EITKTPQWRA  240
GPLGPKTLCN ACGVRYKSGR LYPEYRPAAS PTFVPSLHSN SHKKVLEMRT KTPDENPART  300
SQEHELIPKS AEIWVKWGVN SSRAEEKSSH YPLLGEANSS SESEADSELS SSSWAIGGSV  360
LPLEPPKTTS NWDDPCSASY APLSDPSSDS FIMESFGVLR VPGG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146150KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.14e-45GATA family protein