PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033561-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 524aa    MW: 61006.2 Da    PI: 7.7148
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033561-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix93.71.8e-29119204187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW++qe+l+L+e+r++++++++++++k+plW+ev++ m +e+g++r+ k+C+ek+enl k+ykk+keg+ +r  ++ +++++f+qlea
  AUR62033561-RA 119 RWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVARIMsEEHGYQRTGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 204
                     8*************************************999*****************************98..55667*******85 PP
2trihelix58.32.1e-18416483167
        trihelix   1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 
                     +W + ev  Li++r++me+r+++ g +++ lWe++++km+  g+ rs+  Ckekw++lnk++++  ++
  AUR62033561-RA 416 QWLETEVTRLIQLRTSMESRFQQcGFSEEVLWEDIAAKMAYLGYDRSASVCKEKWDSLNKYFQEKDNN 483
                     7*********************967899**********************************986654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MEDQYGISDL RQFISRAATV TQFPPFPVQQ PPSLPPSSDL FSAHHNHRGL SLPITAAXXX  60
XXXXXYEMVV MGRSMSDMLH HNNTHHHPGH FNSESTTTTA TAAANHLGGF DGGDGGAARW  120
PRQETLTLLE IRSRLDHKFK EANQKGPLWD EVARIMSEEH GYQRTGKKCR EKFENLYKYY  180
KKTKEGKAGR QDGKHYRFFR QLEALYGEHN SQHHHPMTST SDTHHIAGNM VPHFHPTPEN  240
VVPSKLGVTD NHQLHRPTSV SLSNSSDYET SSSDNEGGGS IESDESKKKK RGKRSWKAKV  300
KEFIDYQMRK IMEKQEAWLE KMMYTLDSRE RERMEREEEW RKQEAGRMER EHKFWASERA  360
WIEARDSALM TALEKLTNTR EKEVASDIDH RXXXXXXXRS NEHHCRVGIH DNTHHQWLET  420
EVTRLIQLRT SMESRFQQCG FSEEVLWEDI AAKMAYLGYD RSASVCKEKW DSLNKYFQEK  480
DNNIIIRDDG NKKRKENYGE EHRIDNKFPT LNHERHGENK VIC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1287294KKKKRGKR
2287314KKKKRGKRSWKAKVKEFIDYQMRKIMEK
3288315KKKKRGKRSWKAKVKEFIDYQMRKIMEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.14e-93Trihelix family protein