PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62033525-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 385aa MW: 42912.2 Da PI: 8.9982

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62033525-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.8	8.6e-07	57	119	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke +r rr NRe+Ar +R++a eeL++k++e +eN++Lk + + ke ++l++ + AUR62033525-RA 57 EKEARRIRRILANRESARQTIRRRQAFHEELTRKAAEQASENERLKRNKDLAVKEFQSLQTTN 119 799*******************************************99999899999887655 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MKYVGSKGHG DQPNIFQEEC LSVDVKPEKS YESTERGRVC NSAHNTGRSR HNLTEAEKEA 60 RRIRRILANR ESARQTIRRR QAFHEELTRK AAEQASENER LKRNKDLAVK EFQSLQTTNQ 120 KLKGQLSQTL GFKLGENKGE AHQPSCPDTH NVNPHSANWA QFVYKKLSAS TFVIPASLPP 180 SDLNVSNLSP CSFSEQENPR SINGQNMPWC ILPCPVFLPI HDIKNFSSLH VKDSDEGTSV 240 DSNHVHSPSS DYSPSSVIRC VHNCQLVSPA DRISSGLPST QDDCRNGFHR FPFGLSLDGG 300 GQKMIPCCSR GDFALEREDC VTPHTLVNTN VSSAACIESA SALTEKRKER VLKTRERNVA 360 GAEARKKRKE LMKLKSRLHC QLIG*

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MKYVGSKGHG DQPNIFQEEC LSVDVKPEKS YESTERGRVC NSAHNTGRSR HNLTEAEKEA  60
RRIRRILANR ESARQTIRRR QAFHEELTRK AAEQASENER LKRNKDLAVK EFQSLQTTNQ  120
KLKGQLSQTL GFKLGENKGE AHQPSCPDTH NVNPHSANWA QFVYKKLSAS TFVIPASLPP  180
SDLNVSNLSP CSFSEQENPR SINGQNMPWC ILPCPVFLPI HDIKNFSSLH VKDSDEGTSV  240
DSNHVHSPSS DYSPSSVIRC VHNCQLVSPA DRISSGLPST QDDCRNGFHR FPFGLSLDGG  300
GQKMIPCCSR GDFALEREDC VTPHTLVNTN VSSAACIESA SALTEKRKER VLKTRERNVA  360
GAEARKKRKE LMKLKSRLHC QLIG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	346	368	KRKERVLKTRERNVAGAEARKKR
2	365	370	RKKRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	1e-31	bZIP family protein