PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62033390-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 1052aa MW: 121696 Da PI: 6.0374

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62033390-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59	1.5e-18	135	237	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 Y+++A +GFs+rk++++ +++++ +t++++vCs egkr++ +kk ++++ r+ + tr +Cka+++ k +k+g++ev + AUR62033390-RA 135 LYEKHAAILGFSIRKHTTRFKQHTKIVTEKNYVCSAEGKRHSGQKKtklvemvdeedvnvKTRKPRQVSITRSNCKACIRAKVNKEGQFEVVAHV 229 7***************************************99999*******887888888899********************* PP FAR1 83 leHnHela 90 eHnHel+ AUR62033390-RA 230 IEHNHELT 237 ****97 PP
2	FAR1	59	1.5e-18	426	528	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 Y+++A +GFs+rk++++ +++++ +t++++vCs egkr++ +kk ++++ r+ + tr +Cka+++ k +k+g++ev + AUR62033390-RA 426 LYEKHAAILGFSIRKHTTRFKQHTKIVTEKNYVCSAEGKRHSGQKKtklvemvdeedvnvKTRKPRQVSITRSNCKACIRAKVNKEGQFEVVAHV 520 7***************************************99999*******887888888899********************* PP FAR1 83 leHnHela 90 eHnHel+ AUR62033390-RA 521 IEHNHELT 528 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1052 aa Download sequence
MENSTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA 60 DEAIDNADEA IENAEDPIHN AENQVVPDKS IDSNSEQTTK SDATKDTNPI DAYGLDLRGS 120 FVGVVRETFV EILELYEKHA AILGFSIRKH TTRFKQHTKI VTEKNYVCSA EGKRHSGQKK 180 TKLVEMVDEE DVNVKTRKPR QVSITRSNCK ACIRAKVNKE GQFEVVAHVI EHNHELTKPQ 240 WHYLHRSERK MTEEKVVTIK TMKSSGLTTM DTYNYMATEA GGEQNIGHSV VDHLNFCSRL 300 RMEQIEAGDA QTLRQIETEF EIDLNRSIIE EEETNCFGDE FVPIFNNPDN ADEAIDNADE 360 AIENAEDPIH NAENQVVPDK SIDSNSEQTT KSDATKDTNP IDAYGLDLRG SFVGVVRETF 420 VEILELYEKH AAILGFSIRK HTTRFKQHTK IVTEKNYVCS AEGKRHSGQK KTKLVEMVDE 480 EDVNVKTRKP RQVSITRSNC KACIRAKVNK EGQFEVVAHV IEHNHELTKP QWHYLHRSER 540 KMTEEKVVTI KTMKSSGLTT MDTYNYMATE AGGEQNIGHS VVDHLNFCSR LRMEQIEAGD 600 AQTLVNILSQ EQSEDPNFFF RVKFDKEGRI CNIFWRDSMM LEDYRIYGDV LVFDTTYRTN 660 IYNLICAPFV GINNHWHNCM FACAFIGDET TDSFVWLLQT FFKAMEDRKP TSIFTDQDQA 720 MENAILEVIP NTRHRLCIWH LEQNAITRFG ALKKDKEFKF AFNQCLKMCV TEQEFEAKDF 780 FSTGILSSQR SESTNHAIGF RASKATTLTE FYTIFKKTTN RWRSIEKYDE FTCIKSIAFT 840 SLPLSGMLKH AAQVFTLSLF RNFEEEFGYS MATTVQMLGS NEECLLYQVT LEDKPWSAHQ 900 VNYIQESQTV WCTCKNFEAS GWLCYHCIRI LHLHSVTRIP DKYVSKRWTK FAKTEAWDRL 960 KNQDPKQQYI PWRQTMMRKY YNLILKSQEN EETRAFMEES FRNSLKMVED LLASAAQKKV 1020 QKLLLTFLMW QTTLKAILTL LQHRVQAHVY Q*

Sequence ? help Back to Top

Protein Sequence Length: 1052 aa Download sequence

MENSTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA  60
DEAIDNADEA IENAEDPIHN AENQVVPDKS IDSNSEQTTK SDATKDTNPI DAYGLDLRGS  120
FVGVVRETFV EILELYEKHA AILGFSIRKH TTRFKQHTKI VTEKNYVCSA EGKRHSGQKK  180
TKLVEMVDEE DVNVKTRKPR QVSITRSNCK ACIRAKVNKE GQFEVVAHVI EHNHELTKPQ  240
WHYLHRSERK MTEEKVVTIK TMKSSGLTTM DTYNYMATEA GGEQNIGHSV VDHLNFCSRL  300
RMEQIEAGDA QTLRQIETEF EIDLNRSIIE EEETNCFGDE FVPIFNNPDN ADEAIDNADE  360
AIENAEDPIH NAENQVVPDK SIDSNSEQTT KSDATKDTNP IDAYGLDLRG SFVGVVRETF  420
VEILELYEKH AAILGFSIRK HTTRFKQHTK IVTEKNYVCS AEGKRHSGQK KTKLVEMVDE  480
EDVNVKTRKP RQVSITRSNC KACIRAKVNK EGQFEVVAHV IEHNHELTKP QWHYLHRSER  540
KMTEEKVVTI KTMKSSGLTT MDTYNYMATE AGGEQNIGHS VVDHLNFCSR LRMEQIEAGD  600
AQTLVNILSQ EQSEDPNFFF RVKFDKEGRI CNIFWRDSMM LEDYRIYGDV LVFDTTYRTN  660
IYNLICAPFV GINNHWHNCM FACAFIGDET TDSFVWLLQT FFKAMEDRKP TSIFTDQDQA  720
MENAILEVIP NTRHRLCIWH LEQNAITRFG ALKKDKEFKF AFNQCLKMCV TEQEFEAKDF  780
FSTGILSSQR SESTNHAIGF RASKATTLTE FYTIFKKTTN RWRSIEKYDE FTCIKSIAFT  840
SLPLSGMLKH AAQVFTLSLF RNFEEEFGYS MATTVQMLGS NEECLLYQVT LEDKPWSAHQ  900
VNYIQESQTV WCTCKNFEAS GWLCYHCIRI LHLHSVTRIP DKYVSKRWTK FAKTEAWDRL  960
KNQDPKQQYI PWRQTMMRKY YNLILKSQEN EETRAFMEES FRNSLKMVED LLASAAQKKV  1020
QKLLLTFLMW QTTLKAILTL LQHRVQAHVY Q*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-80	FAR1 family protein