PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62033340-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 300aa MW: 33764.9 Da PI: 6.506

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62033340-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.1	4.8e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEdellv++++++G g+W++ ++ g+ R++k+c++rw +yl AUR62033340-RA 14 KGPWTSEEDELLVKYINKHGHGNWRSLPKNAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53.3	6.5e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l +++++ lG++ W++Ia+ ++ gRt++++k+ w+++l AUR62033340-RA 67 RGPFTPEEEKLVIQLHAILGNR-WAAIAAQLP-GRTDNEIKNLWNTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MGRSPCCEKE GLKKGPWTSE EDELLVKYIN KHGHGNWRSL PKNAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF TPEEEKLVIQ LHAILGNRWA AIAAQLPGRT DNEIKNLWNT HLRKRLICMG 120 LDPQTHEPAS TPAGPSTKPP ASPSTRHMTQ WESARLEAEA RLSSESLVCH PHSASFLDSD 180 YFLRLWNSEV GESFRNFEMK EKIACQSPIS QASTSTTKCA STSGLTVDNR DEEIKCKNFI 240 KTEVLDVNTR SDSSSSNELE DSSESALQLL LDFPGYNDMS FLEDPVDNYS DNACFFKFY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-113	MYB family protein