PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62032797-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 364aa MW: 40644.1 Da PI: 4.817

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62032797-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	40.6	5.6e-13	21	47	1	27
G2-like 1 kprlrWtpeLHerFveaveqLGGsekA 27 kprlrWtp+LH+rFveav+qLGG++ AUR62032797-RA 21 KPRLRWTPDLHQRFVEAVDQLGGANSC 47 79*********************9865 PP
2	Myb_DNA-binding	25.4	3.4e-08	23	43	1	21
TSSS-HHHHHHHHHHHHHTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGg 21 r+rWT+++++++v+av qlGg AUR62032797-RA 23 RLRWTPDLHQRFVEAVDQLGG 43 89******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGHLQNLQTQ DMNLVLSTDA KPRLRWTPDL HQRFVEAVDQ LGGANSCVAN PFILFLLSNA 60 EGSYESDRHT RTYFVSPEES FTGNSSTASK FRLGKNHQHI QQSETCSESK PDDADYEESQ 120 AMDTLNLFGE EKEINDPSQE QINENVQISE AIKVQMEVQK KLHEQIEVQR HLQLRIEAQG 180 KYLQKVLKKA QETLSSYNCT AAGVEHAKAE LSQLVSMVST SSFSGLTEVT DLSLEQKHIM 240 RHAVCSAESS LTSSESSEQK ETGLENEEIT DKGSQEQCLF VLPLFDQSRT KGSGPRKRSR 300 SIVFDSNCVE QTDSKKSCKQ GYGEEMGHGL KKFGLLETID LNSQCENDLD LGPRQAIDLN 360 SKE*

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGHLQNLQTQ DMNLVLSTDA KPRLRWTPDL HQRFVEAVDQ LGGANSCVAN PFILFLLSNA  60
EGSYESDRHT RTYFVSPEES FTGNSSTASK FRLGKNHQHI QQSETCSESK PDDADYEESQ  120
AMDTLNLFGE EKEINDPSQE QINENVQISE AIKVQMEVQK KLHEQIEVQR HLQLRIEAQG  180
KYLQKVLKKA QETLSSYNCT AAGVEHAKAE LSQLVSMVST SSFSGLTEVT DLSLEQKHIM  240
RHAVCSAESS LTSSESSEQK ETGLENEEIT DKGSQEQCLF VLPLFDQSRT KGSGPRKRSR  300
SIVFDSNCVE QTDSKKSCKQ GYGEEMGHGL KKFGLLETID LNSQCENDLD LGPRQAIDLN  360
SKE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-47	G2-like family protein