PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032637-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 275aa    MW: 30401.8 Da    PI: 8.6761
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032637-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.52.6e-1640123186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++  v  L+ea+++++   +r+klk+++We+v+k++      ++  ++++qCk+k+e+++kry+ + +++ +      s++p+f++l+
  AUR62032637-RA  40 EWSEGAVSSLLEAYESKWILRNRAKLKGQDWEDVAKHVssraNNTKSPKTQTQCKNKIESMKKRYRSESATADS------SSWPLFSRLD 123
                     5*************************************88777777889999****************999997......57*****998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEKETNQDDQ NPSPTKLEQS PRKPLLVGGS SGGDRLKRDE WSEGAVSSLL EAYESKWILR  60
NRAKLKGQDW EDVAKHVSSR ANNTKSPKTQ TQCKNKIESM KKRYRSESAT ADSSSWPLFS  120
RLDNLLRGTG GSTGLSSAHS SPMKATAVAK IAQNSQESNG AEPMAKDCDE VAAKVSDQIS  180
DKNHNDDDHI ETDSSTPALY KSIRWLGEAV VRSEQVRMDT MRELERMRVE AEAKRGEMDL  240
KRTEIIANTQ LEIARLFAST TGKSVDSSLR IGRS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.17e-95Trihelix family protein