PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62032284-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HSF

Protein Properties

Length: 384aa MW: 43468.7 Da PI: 5.9277

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62032284-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.4	1.5e-35	46	138	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+yei++d+++++++sw++ g+sfvv+d++ fa+ +Lp+ Fkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F kg+k++l++ AUR62032284-RA 46 FLTKTYEIVDDPSTDSIVSWNRGGQSFVVWDPHAFASGLLPRNFKHNNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFLKGQKHQLKN 131 9**************************************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ AUR62032284-RA 132 IRRRKHS 138 **976 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MNLLYPVKKE FPESSSTTLT FSGEISRNFP APQPREGLHE VGPPPFLTKT YEIVDDPSTD 60 SIVSWNRGGQ SFVVWDPHAF ASGLLPRNFK HNNFSSFVRQ LNTYGFRKID PDRWEFANEG 120 FLKGQKHQLK NIRRRKHSSN PMFSQQGVID PCVELGRFGV DGEVDRLRRD KQVLMMELVK 180 LRQQQQNTRS FLQAMEQRLQ ATEMKQQQMM NFLARAMQNP AFLQQLVQQK EKRKELEEAL 240 SKKRRRPIDQ GQKGHLHCGE SSGYASVTSG SSVPLGMGHV KAEPLDFGSY GYDQYDPLGP 300 VSELEALALE MQGYNRGGTE LGEGQRGGLD QFEGDDKELD EEFWEELLNE RFKAAASSDQ 360 GGEEQEDVNV LADRLGYLGS SPK*

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MNLLYPVKKE FPESSSTTLT FSGEISRNFP APQPREGLHE VGPPPFLTKT YEIVDDPSTD  60
SIVSWNRGGQ SFVVWDPHAF ASGLLPRNFK HNNFSSFVRQ LNTYGFRKID PDRWEFANEG  120
FLKGQKHQLK NIRRRKHSSN PMFSQQGVID PCVELGRFGV DGEVDRLRRD KQVLMMELVK  180
LRQQQQNTRS FLQAMEQRLQ ATEMKQQQMM NFLARAMQNP AFLQQLVQQK EKRKELEEAL  240
SKKRRRPIDQ GQKGHLHCGE SSGYASVTSG SSVPLGMGHV KAEPLDFGSY GYDQYDPLGP  300
VSELEALALE MQGYNRGGTE LGEGQRGGLD QFEGDDKELD EEFWEELLNE RFKAAASSDQ  360
GGEEQEDVNV LADRLGYLGS SPK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	246	KRKELEEALSKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-121	HSF family protein