PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032101-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 142aa    MW: 16413.4 Da    PI: 7.6657
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032101-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.6e-054970223
                    EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                    kCp C+k F+++  L  H++ H
  AUR62032101-RA 49 KCPFCDKEFTNSQALGGHQNAH 70
                    7******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MEKIDHFPIG ASTHKKLRLF GFDFDFHGDD ATNPSGNDRS DEQMQVKRKC PFCDKEFTNS  60
QALGGHQNAH KKERLMKRRS QFEEKKASIE FYLRSLDHPF TNSLVYDSMN EPQLLFNSTK  120
PYHKHGCDGL DLSPLQIYVP Y*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.14e-13C2H2 family protein