PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031986-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 276aa    MW: 31263.3 Da    PI: 6.1665
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031986-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.82.6e-1583135155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR++iN+ ++ Lr llP  +   + kKls  ++  ++ eYI +Lq
  AUR62031986-RA  83 KKLNHNASERDRRKKINDMYSSLRALLPAtD---QRKKLSIPSTIARVLEYIPQLQ 135
                     6789*************************77...9999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MLAMSPLCPT NLGWDYPLEF ETNQAFNNFD FDAMFLANFS SSQAQDDCDD NHQVSSDHAK  60
RSESPQGTSS TDQIDNNNPL LSKKLNHNAS ERDRRKKIND MYSSLRALLP ATDQRKKLSI  120
PSTIARVLEY IPQLQKQIED LTHKKEGFTS KMSAILGNSG EFIQEQKHKR KCTTKETTSC  180
SISSNKLGDK EMVIQISTYE RISVSEVLLH LEKNGYVVID VSSFQSFGGT TFYNIHLWME  240
GSYVVSIEKL NETLLSMLQK QQLQMQMEII PIFVA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-46bHLH family protein