PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031984-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 275aa    MW: 31627.1 Da    PI: 6.5259
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031984-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.88e-1385137155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     r+ +hn+ Er RR++iN  ++ Lr+llP  +   + ++ls  +++ ++ +YI +Lq
  AUR62031984-RA  85 RKINHNASERDRRKKINVLYSSLRDLLPAnD---QIRRLSIPATVARVLKYIPELQ 137
                     6889*************************66...9999***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MCPFVPTLGL EYAIELELET YDQVLLDNNY LNLDAIFLPN ILLSQAQDDS NDHVKLKQRK  60
SSLSTSSADH QFGAAMTTTT TTMKRKINHN ASERDRRKKI NVLYSSLRDL LPANDQIRRL  120
SIPATVARVL KYIPELQEEV KDLTHRKEEL LSEISVLQGN NTRENIHEEK PKMDKIKEKS  180
TSFSVSMNNL SDKEMVIQIS TLFERVSLSE VLILLEKNGN VIIDVSSFQS FGGRFFYNIH  240
LWLEENYVVN YDKLNEELLS LFQKQKQKLS TPCR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18499KRKINHNASERDRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.16e-42bHLH family protein