PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031976-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 307aa    MW: 33611.8 Da    PI: 4.92
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031976-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.7e-08232272954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r+RR+ri +++  L++l+P        K++ a++L +A +Y+k L
  AUR62031976-RA 232 ARQRRERISERLRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 272
                     69******************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MDGCTSMAQW SNIYHQQGGI ETSRSISSLI LDPIHEELHQ EENGQGILIP WNNEGAPRNN  60
QMCSSLPMII SPFSNNIIHQ SQPFDKSTNK GTASANNSFD QQSFECLLSG TNSNTDTSVE  120
DDGISMIFSD CRNFFNYNSN NGNNHNDNEP KKRGNIEQDF QGRHKGSSNI SFQQGSSSGS  180
SIEEPDAEAI QQMKEMIYRA AAFRPVNFGV DLVERPKRKN VRISSDPQTV AARQRRERIS  240
ERLRVLQKLV PGGSKMDTAS MLDEAANYLK FLRNQTNSAA NVSGDQDAAG SQLGVVGDDQ  300
DAAGAA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1233238RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.19e-44bHLH family protein