PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031810-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 306aa    MW: 33014.5 Da    PI: 5.0354
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031810-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.41.9e-16220266455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn  ErrRRdriN+++  L+el+P +      K +Ka++L +A+eY+ksLq
  AUR62031810-RA 220 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 266
                     6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MAEDEMATWL HYPLEDLYSD LLGDNTQTTQ LPAVATTVVR QQPQEVIHPP AAVTVVVKPP  60
PVPPPPKPTK NFQMFSRMRG KDPEVSSSMR PELTVVDSNT TPALVTMKSL GEVSSAFPSG  120
GEIGGSDFVL DTKGSGEVTV SSSSGGYSGG PSKAAAEDAR DKGIKNEAGD RKRKRRDNDE  180
SMTPSTTAID QDVELEGDDD DEKKHSHGSH GSKRSRAAEV HNLSERRRRD RINEKMKALQ  240
ELIPRCNKSD KASMLDEAIE YLKSLQMQVQ DQPVSQPGSS KPASTSKSEG QPGPSTSKSE  300
ADDDQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171176RKRKRR
2225230ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.13e-33bHLH family protein