PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031604-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 311aa    MW: 35025.3 Da    PI: 8.04
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031604-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.22.2e-30148207159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+YY+C+ a +Cpvkkkv+rsa+dp++++ tYegeHnh+
  AUR62031604-RA 148 VKDGYQWRKYGQKVTRDNPSPRAYYKCANApECPVKKKVQRSADDPTILVATYEGEHNHP 207
                     58**************************999****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MESSSNWVLD TSFGFNLNLN LCNTSEIDDK IHKDERKSGN LEEELNRMNN ENKKLTKLLA  60
SMCKNYSVLQ NQLIGLISPS SKGENEQDQN PKKRKFFETM DCGIQGNTEQ SCISYDDSLK  120
RVRLLSSKPK ITNKMLIRTD ISDTSLIVKD GYQWRKYGQK VTRDNPSPRA YYKCANAPEC  180
PVKKKVQRSA DDPTILVATY EGEHNHPQPN SRDQLDQHVL LSSSQSVNDN AVIRSPSNIP  240
TLNLDLINHN YSNNTEKTNA IESKVDTKAL QRLLVEQMAS SLTKDPSFTS ALAAAISGKV  300
SENNYCERWL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-75WRKY family protein