PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031584-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 284aa    MW: 30869.9 Da    PI: 6.5041
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031584-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023109131123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  AUR62031584-RA 109 FSCNYCQRKFYSSQALGGHQNAH 131
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MEQAELEPCL SGTSSTISAS QEAPPQERLY RSLHQQHKAS KEAQLEDQDA EQETVSQTHI  60
PLDLMLSNED SCNEFNAELN LIDCLNVGSS QSSSESPPQG SENCEPRVFS CNYCQRKFYS  120
SQALGGHQNA HKRERTIAKR NQRIGATIAA TAAAFGHPYL HQQHNYSNIA SLPLHGSPNR  180
SLGIQVHSMI HKTPTNNMTM SSSGNVYGHH GWLRLPIEQQ PAVGKLVSET YHGSATTGPS  240
SRGGAGRFNI VDEGVTSGGW WSGDSQIKSN SEESTKLDLS LKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.15e-49C2H2 family protein