PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031129-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 157aa    MW: 18405.4 Da    PI: 9.7607
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031129-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.37.5e-1547138495
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
                     +l p++v    +l++pkk a eh+    ++++++l+    rsW+v ++++k+ ++   +l  + ++Fv +n+L+e D++vF+l+++     ++v 
  AUR62031129-RA  47 TLRPAHVYWGFMLTIPKKWAIEHMVH--GPQDVKLQV-GDRSWNVGYRVTKSCNKvvQYLNPNSQKFVFDNNLEEHDTCVFELIQKgLLSVFNVY 138
                     677888888899***********755..555677555.66*********9999999989***********************9974333333555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MCYISNRRVP TEEEKIRALE KATRFMKAKR YTERENKIPS PPMLQITLRP AHVYWGFMLT  60
IPKKWAIEHM VHGPQDVKLQ VGDRSWNVGY RVTKSCNKVV QYLNPNSQKF VFDNNLEEHD  120
TCVFELIQKG LLSVFNVYIF RVIDEIVPLT LSNYRA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-12B3 family protein