PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62030788-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 351aa MW: 40044.6 Da PI: 6.3282

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62030788-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.5	1.5e-28	79	129	2	52
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 prlrWtp+LH +F++ave+LGG++kAtPk +l+lm++kgL+++hvkSHLQ AUR62030788-RA 79 PRLRWTPDLHLQFIHAVERLGGQDKATPKLVLQLMNIKGLSIAHVKSHLQD 129 8*************************************************6 PP
2	Myb_DNA-binding	50	6.6e-16	80	130	1	47
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqky 47 r+rWT+++++++++av++lGg t+k++ + m+ kg++ ++ks++q++ AUR62030788-RA 80 RLRWTPDLHLQFIHAVERLGGQdkaTPKLVLQLMNiKGLSIAHVKSHLQDH 130 89***********************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MQERNDDQSE CSKTNRCDQE GEEDQDDEEE SDENDDERTF NNSKNNGGCS SNSTVEETSD 60 ELKKSSSSTV RPYVRSKTPR LRWTPDLHLQ FIHAVERLGG QDKATPKLVL QLMNIKGLSI 120 AHVKSHLQDH VTKDIFLKLE IATSSTLARF LCYKAIAKLQ VPVSGPTKTT HQNWMHDLYT 180 IDMDSRVNNN VRARFGNELH PRQIIEQAHQ EPRPILYRDQ TRQNPSTRPI TRDLSPRMLH 240 PLHKEILEQE KFIISNSKDS LQNRMALKRK RVDCDGNIDL DLSLKPPRRE SEAIILDDEE 300 VDKSISLSLF LHHTSSSSTS KLDNKVREGG DSNNKEEYCA RGTSTLDLTL *

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MQERNDDQSE CSKTNRCDQE GEEDQDDEEE SDENDDERTF NNSKNNGGCS SNSTVEETSD  60
ELKKSSSSTV RPYVRSKTPR LRWTPDLHLQ FIHAVERLGG QDKATPKLVL QLMNIKGLSI  120
AHVKSHLQDH VTKDIFLKLE IATSSTLARF LCYKAIAKLQ VPVSGPTKTT HQNWMHDLYT  180
IDMDSRVNNN VRARFGNELH PRQIIEQAHQ EPRPILYRDQ TRQNPSTRPI TRDLSPRMLH  240
PLHKEILEQE KFIISNSKDS LQNRMALKRK RVDCDGNIDL DLSLKPPRRE SEAIILDDEE  300
VDKSISLSLF LHHTSSSSTS KLDNKVREGG DSNNKEEYCA RGTSTLDLTL *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	5e-32	G2-like family protein