PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62030471-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 369aa MW: 42228.4 Da PI: 8.3929

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62030471-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.4e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rWTteEd ll +vkq+G++ W++++++m+ + R +k+c +rw +yl AUR62030471-RA 4 RQRWTTEEDALLSAYVKQYGPREWHLVSQRMNtlLDRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.1	1.5e-11	59	104	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w y+ AUR62030471-RA 59 KGSLTEEEQRLVIRLQAMHGNK-WKKIAAEVP-GRTAKRLGKWWEVYK 104 6788****************.*****.*****99998886 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MKERQRWTTE EDALLSAYVK QYGPREWHLV SQRMNTLLDR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAMHGNK WKKIAAEVPG RTAKRLGKWW EVYKEKQERT KKETSKCLEP 120 IEEGKYDHTL ETFAEKLVKE RMPPRQTFLM ATSNGVFLHS DHPSPPVPPP PPVTSTTTML 180 PPWLSTSNGV WLPSSPYVTL SLSSSIVPTH PPTPVTWVPQ EMGSHNIDNY PLTLGCLPSC 240 AGAHPEQMIM SELMDCCGEL DEGHHALAAH KKEAAWRLNR VELQLESEKA NRKREKMEEI 300 EAKINALKDE QKASIERIEA ECREQLAGLR RDAEAKEQKL AEQWVTKHTR ITKLLDQMGC 360 RTRVTEPS*

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MKERQRWTTE EDALLSAYVK QYGPREWHLV SQRMNTLLDR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAMHGNK WKKIAAEVPG RTAKRLGKWW EVYKEKQERT KKETSKCLEP  120
IEEGKYDHTL ETFAEKLVKE RMPPRQTFLM ATSNGVFLHS DHPSPPVPPP PPVTSTTTML  180
PPWLSTSNGV WLPSSPYVTL SLSSSIVPTH PPTPVTWVPQ EMGSHNIDNY PLTLGCLPSC  240
AGAHPEQMIM SELMDCCGEL DEGHHALAAH KKEAAWRLNR VELQLESEKA NRKREKMEEI  300
EAKINALKDE QKASIERIEA ECREQLAGLR RDAEAKEQKL AEQWVTKHTR ITKLLDQMGC  360
RTRVTEPS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-130	MYB family protein