PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62030278-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 676aa MW: 73115.6 Da PI: 5.6038

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62030278-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.3	9.2e-15	209	269	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++k+ r+++NRe+A+ sRqRKk+++eeLe+kv ++ + ++L +++ + e a+l++++ AUR62030278-RA 209 DDKKKARLMRNRESAQLSRQRKKQYVEELEDKVRSMHSTITDLNGKISYMMAENASLRQQL 269 689*****************************************************99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MEDPLPYDPH PSTPLPIPPL DHAHLLSSDF FPENDDDFNF GADFDFTFDD LTFVDDLLLD 60 PQGDGVFDSD VSDVLEGRNS GDSEIVVGNP NLRVYDCSSP EGGNHHGGVS SEESNFGVKL 120 NCASPESGSC KSNSAVSQTF RGGGDSGNVS DDRDVSSSSY VENIVDDLSS KRKKEYDHEQ 180 IEEGSKINKF RKSGMSENVS VDLGSVDGDD KKKARLMRNR ESAQLSRQRK KQYVEELEDK 240 VRSMHSTITD LNGKISYMMA ENASLRQQLA GAGGVCAAPP PPHGMYPMAP MPYPWMACPP 300 YMVKPQGSHV PLVPIPRLKP QQPAPAPKVS RRSDSKKGEG KTKKVASVSL LGLLFCMLLF 360 GGLVPLVNVK YGGIGFDGVQ KGSVFMVDKH VGVSEGKISS HGRILQQSNS SDGIGPNGNS 420 SEPLVASLYV PRNDKLVKID GNLIIHSVLA SEKAMASKTD EESKPSEETS LAIHGSYPPY 480 PIPGPGSNNW RHPHLDRNQN GRQRALGSSS SEGFTPAGSD GKLQQWFREG LAGPMLSSGM 540 CTEVFQFDIS PTPGSIVPAT SIVNVTSERR QNSTRPNKPR NRRILHEPVV PLDGHSLNAT 600 EEHVAHEQND GLQGNRTSSS MVVSVLVDPR EVGDGDGEGV IRSKTMSRIF VVLIDSVKYA 660 SIAYLEDAFR NADCL*

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MEDPLPYDPH PSTPLPIPPL DHAHLLSSDF FPENDDDFNF GADFDFTFDD LTFVDDLLLD  60
PQGDGVFDSD VSDVLEGRNS GDSEIVVGNP NLRVYDCSSP EGGNHHGGVS SEESNFGVKL  120
NCASPESGSC KSNSAVSQTF RGGGDSGNVS DDRDVSSSSY VENIVDDLSS KRKKEYDHEQ  180
IEEGSKINKF RKSGMSENVS VDLGSVDGDD KKKARLMRNR ESAQLSRQRK KQYVEELEDK  240
VRSMHSTITD LNGKISYMMA ENASLRQQLA GAGGVCAAPP PPHGMYPMAP MPYPWMACPP  300
YMVKPQGSHV PLVPIPRLKP QQPAPAPKVS RRSDSKKGEG KTKKVASVSL LGLLFCMLLF  360
GGLVPLVNVK YGGIGFDGVQ KGSVFMVDKH VGVSEGKISS HGRILQQSNS SDGIGPNGNS  420
SEPLVASLYV PRNDKLVKID GNLIIHSVLA SEKAMASKTD EESKPSEETS LAIHGSYPPY  480
PIPGPGSNNW RHPHLDRNQN GRQRALGSSS SEGFTPAGSD GKLQQWFREG LAGPMLSSGM  540
CTEVFQFDIS PTPGSIVPAT SIVNVTSERR QNSTRPNKPR NRRILHEPVV PLDGHSLNAT  600
EEHVAHEQND GLQGNRTSSS MVVSVLVDPR EVGDGDGEGV IRSKTMSRIF VVLIDSVKYA  660
SIAYLEDAFR NADCL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	570	583	RQNSTRPNKPRNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-113	bZIP family protein