PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029874-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 209aa    MW: 23159.8 Da    PI: 8.8765
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029874-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.3e-0895142455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+++Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  AUR62029874-RA  95 SHSIAERVRRGKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 142
                     8*************************9....35599999**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MFGNTQVSEQ AQADSAVLSG NGNECSGSGI TNKRKAEDLA ESSSSLHSSS PTSKDRARKK  60
YSSGRGKRSK NNDKDEGNPK EVVHVRARRG QATDSHSIAE RVRRGKINER LRCLQDIVPG  120
CYKTMGMAVM LDEIINYVQS LQNQVEFLSM KLTAASQFYD FNAVNEPVEK KQKIKGCNSE  180
EVEDVQRIIN KGGYDEAQTN LYQSTWPF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.18e-56bHLH family protein