PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029690-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 438aa    MW: 48702 Da    PI: 7.6066
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029690-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.91e-1094196188
            FAR1   1 kfYneYAkevGFsvrkskskks.....krngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                     kf+++Y+k+ GF v +++ +++     +++++  ++ ++C + g+++ ++k           + + ++r+++++gC  +++   ++dg wev+k 
  AUR62029690-RA  94 KFWRQYGKQRGFGVLRAAGNYKtengrSDKTKLRSYIWRCECAGQPDIRRKVngkrvygggLSLQLNRRKTKKCGCLVQMRAACKQDGSWEVKKA 188
                     69***********98877655536665555667888899********999887888888887777789**************************9 PP

            FAR1  82 eleH.nHe 88 
                     +  H nH+
  AUR62029690-RA 189 VVVHvNHN 196
                     98886775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    
MALVDDDFNH SEHGSEEGFC TPLRCVVETQ EGQIHEVELL STPIDSVVDE FNHLEEGFCT  60
PLRCVVENEE GQVEDKLNDP EVGMVFSSWE EADKFWRQYG KQRGFGVLRA AGNYKTENGR  120
SDKTKLRSYI WRCECAGQPD IRRKVNGKRV YGGGLSLQLN RRKTKKCGCL VQMRAACKQD  180
GSWEVKKAVV VHVNHNPTPR KSRYISMFRQ ASAQQKYVEM ALEGLSNLEE SIDAAIMEAT  240
DDANVAMPSE DAMPCDDIMT EGYSNVVGVE DIDLTPHVVL ATKSTDLPTH VGDPLSRKKK  300
AHRPRTKRFL ACTEKKWKKA STSVQQQTQA TASGIPVHCY GLNVDEPVTP ISKPRKKRAR  360
KAKANTDVQL VQSVFGNDGP VLSPQNRWVG GIGYGPAYGE LCYFTRSYNN CPNWVARDVL  420
PFVSGAGLYT MATTPSN*