PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62029580-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 223aa MW: 24666.8 Da PI: 8.7267

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62029580-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	34.9	3.1e-11	115	136	1	22
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK vk+++fp AUR62029580-RA 115 LDDGYRWRKYGQKAVKNNKFPS 136 59******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MTTTPFSSIP LENFPFSLTN IIPISHHTPI SSSSSSLIDV YKNGLIGIKT TNTKTELGME 60 MDMNFQHDHG KRLAPNEYVG SSSGGIKENK KDNKEKMKLR RHRYAFHTRS QVDILDDGYR 120 WRKYGQKAVK NNKFPSEDGR GSTVRRWLPG CTQAVPVHAA SEEVAELPIC RRPKWCCGDL 180 VNWQQQGPQP GCAGEELGRD QAADSPASLG DLRAGGLIEA QQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	1e-17	WRKY family protein