PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029578-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 458aa    MW: 50862.4 Da    PI: 4.5185
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029578-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.74.1e-11129169244
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      g WT+ E +ll++a+ ++G + W+++a+ +  ++t  +c+sr+
   AUR62029578-RA 129 GVWTETETLLLLEAILKHGDD-WELVAQNVK-TKTKLECISRL 169
                      78*****************88.********9.**********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    
VVEGVDEEVK VRVEEGPPIG VRVVGTPNTL KPLKEPLSAP GADGGGGVDN GFKLPPLASY  60
SVVFEDLEGE KGVACGNCKE KCESKYYECT KDKCILCLKC FEKGEYGENK SSDDFKLNDS  120
IESSVDQGGV WTETETLLLL EAILKHGDDW ELVAQNVKTK TKLECISRLI ELPFGELMLG  180
SSGKCSARAL DAGQEQKASG LYQENSKMEL CHHQDNQHLE NNHHKEENNH QQEIVVRENA  240
EDIENLEPPL KKSRIDSSDP SRSLMEQVAL ISTMVAPQIT ATAADAAVSV LCDGNPLLRE  300
IFYSDDHISI DKHKSGNLDM EMERAFQSED QEMDTSHPSV NQMPFVEIDK LSQIGDSIPI  360
ALRMRAAVAT ALGAAAAHAK ILADQEEREI EHWMAFIVEA QLKKLQCKVK YMEDLEDMME  420
KEHVLIEESK DDIIEQRLAT LQKKFDAGIF RPRDHNL*