PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62029577-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TCP

Protein Properties

Length: 242aa MW: 25406.8 Da PI: 6.6249

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62029577-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	82.7	9.4e-26	1	63	24	85
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasns 85 ++a+caar+F+L++eLG+++d++ti+WLlqqa+pai ++tg+++++as+ ++s ss+s + AUR62029577-RA 1 MPALCAARVFQLTRELGHKTDGETIQWLLQQAEPAIVAATGSGTIPASFLtASASGASSVSPQ 63 9**********************************************8886333333333322 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MPALCAARVF QLTRELGHKT DGETIQWLLQ QAEPAIVAAT GSGTIPASFL TASASGASSV 60 SPQGASVSLG LHAKINELRA GVEVGNRANW ANFGDSLGRS QVAGTSIWPS IGSGYAQVFD 120 GCSATASNLV SQNSGYVTNF QLQGVGMPTA NMGLLSFTPI LARGTQVPGL QLGLSQDGHG 180 GVIGQIYQQQ QHQQQHHHQA QDHEQNNNSG AAAAETVHPH QHQHQQQHLQ SHSNDDNSRE 240 Q*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	5e-36	TCP family protein