PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62029457-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WOX

Protein Properties

Length: 269aa MW: 29795 Da PI: 4.993

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62029457-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.4	4.2e-07	37	74	2	37
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl 37 ++R+t+t+eq++ L+el++ r p+a++++ + ++l AUR62029457-RA 37 STRWTPTTEQIKLLKELYYIngVRSPTADQIQSICARL 74 58**************95459*********9998 PP
2	Wus_type_Homeobox	48.7	1.8e-16	36	79	2	44
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGk 44 ++tRWtPt+eQik+L+ely+ +G+r+P++++iq i a+L++ G AUR62029457-RA 36 SSTRWTPTTEQIKLLKELYYiNGVRSPTADQIQSICARLRRNGG 79 789**************99*****************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MEQQQQQDEM NMSLNSGKMS NNNTTNTSNN YLCRQSSTRW TPTTEQIKLL KELYYINGVR 60 SPTADQIQSI CARLRRNGGL TWIQDHQDIT LHANKYPCTI NNPGVSCSSS SNGHVIPGGG 120 QLMGGFGYGA VNMENKFRDC SISGGMFNGG NHVNQWTAVG ANYSPYAPAS YANLLDKIST 180 IDEDPYTIDQ DHYGTDTPEI ETLPLFPMHN EELXXXXXXX XXXXFYTIKP PSDGYYTGGY 240 RWSNGSGGNT SLELSLNSYG YGYYSPNI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	1e-21	WOX family protein