PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029280-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 266aa    MW: 28493.5 Da    PI: 7.5049
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029280-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.73.1e-061541921154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  AUR62029280-RA 154 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 192
                     5778999**********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MAEEYCGGAN WWDSTTSTNR SRFDGGSGGG GRSSSTSSTT TLANSGGGAG YGWLTDGPTA  60
VDTKLDASSL QLVGLGLSSQ AMAEWNQQQT AILPNFFSSL QGAQLPNMPT FEEKPKTTME  120
VRDTSSMTKK SGSENNNKRA RNDGASSTLP PFKVRKEKMG DRITALQQLV SPFGKTDTAS  180
VLSEAIEYIK FLHEQVSVLS NPYLKSGGSY QQHQPGNEKA KIDPDGPKQD LRSRGLCLVP  240
VSSTFPVTHE TTVDFWTPTF GGTFR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.15e-66bHLH family protein