PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029002-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YA
Protein Properties Length: 314aa    MW: 34858.6 Da    PI: 8.0712
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029002-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.97e-33165221158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep++VNaKQy++Il+RRq+Rak+e+++kl +k+rkpylheSRh hAl+R RgsgGrF
  AUR62029002-RA 165 DEPIFVNAKQYHGILRRRQSRAKMEAQNKL-IKARKPYLHESRHLHALNRVRGSGGRF 221
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MSNLFINYPP HWNSDDQRIS ESLSKGLSLK MDSPPQLHLN ARSLGFHLQD QDSPSSQSTQ  60
SNHDMTTNTG TNSQDQCMSS ESGQEVNCGK NLGQMKPMYL MGHPEADFNI GQMDYNRAMG  120
CMPYPYGDPY YNEIMNTYGT TPIIHPHMMG MTTTRVPLPL DISEDEPIFV NAKQYHGILR  180
RRQSRAKMEA QNKLIKARKP YLHESRHLHA LNRVRGSGGR FLSTKKHQQS DSTSTNGNHS  240
ISGSNAYNNM VFESHQSQCM ATGTSSISTN GNSFYQQQDG GFLGISSSHT GGAMQHNGGF  300
INNPNQHQAP VVR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.18e-44NF-YA family protein