PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62028979-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 443aa MW: 50347.2 Da PI: 7.0319

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62028979-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	34.9	2.8e-11	17	67	43	96
S-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 43 grsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + W+v++ + ++gr+++++GW +Fv+a+ L +g f++F+++++s f + ++ AUR62028979-RA 17 RNCWRVEVE-KDGDGRMYFRDGWADFVEAHSLGVGNFLLFEYEEQSIF--KARI 67 477***4.34444589**********************987877..5454 PP
2	B3	38.1	2.7e-12	148	222	16	95
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ++pk +++++ ++ +l+++d +g+ W+v+l + +++gr +l GW+eF ++n+++ gD + F++++++ +v+ AUR62028979-RA 148 STIPKAISLKMKLP--SKDDLKFQDVQGKCWTVTLGH-RRDGRAILCHGWREFMNENKIEHGDKLKFEFMSDELV--KVH 222 47888888788777..4458*************55.5555677888******************9876555..333 PP
3	B3	40.7	4.3e-13	290	358	15	86
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 l++pk a+ ++ k+e ++l+d++g+ W +++ + ++gr+vl+kGW eF k g+++gD++ Fk+++ AUR62028979-RA 290 YLYMPKAIARVQKLMKKE--SIVLRDPEGKCWPLQI-KNLSGGRVVLAKGWAEFYKGYGIRTGDMLEFKFVS 358 489999999888777666..5*************.3555666***********************765 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MNGYIPHRFI IESGSTRNCW RVEVEKDGDG RMYFRDGWAD FVEAHSLGVG NFLLFEYEEQ 60 SIFKARIYDR NGCERSVLVD SKGGGGQQQP QKTIDVEGEE SEALEYEPVL VKCHRKKPTR 120 LAPRKYGRGI YKKNRAVPRA YRRTAKLSTI PKAISLKMKL PSKDDLKFQD VQGKCWTVTL 180 GHRRDGRAIL CHGWREFMNE NKIEHGDKLK FEFMSDELVK VHVTKASEVD EHQSDEVTGS 240 LDVDCKHDNK PSTQTPNDKE IETRMTTKKN ICESGSSFSI TWKESGVRTY LYMPKAIARV 300 QKLMKKESIV LRDPEGKCWP LQIKNLSGGR VVLAKGWAEF YKGYGIRTGD MLEFKFVSEY 360 LIHLSINRTY RSPTPIEPDD KDVVICLETL DNEEALAIEP GAVITQGEFD AATEPEAIIT 420 KDEFVAEFDA ATTRPEVNGV IN*

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MNGYIPHRFI IESGSTRNCW RVEVEKDGDG RMYFRDGWAD FVEAHSLGVG NFLLFEYEEQ  60
SIFKARIYDR NGCERSVLVD SKGGGGQQQP QKTIDVEGEE SEALEYEPVL VKCHRKKPTR  120
LAPRKYGRGI YKKNRAVPRA YRRTAKLSTI PKAISLKMKL PSKDDLKFQD VQGKCWTVTL  180
GHRRDGRAIL CHGWREFMNE NKIEHGDKLK FEFMSDELVK VHVTKASEVD EHQSDEVTGS  240
LDVDCKHDNK PSTQTPNDKE IETRMTTKKN ICESGSSFSI TWKESGVRTY LYMPKAIARV  300
QKLMKKESIV LRDPEGKCWP LQIKNLSGGR VVLAKGWAEF YKGYGIRTGD MLEFKFVSEY  360
LIHLSINRTY RSPTPIEPDD KDVVICLETL DNEEALAIEP GAVITQGEFD AATEPEAIIT  420
KDEFVAEFDA ATTRPEVNGV IN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24700.1	2e-19	B3 family protein