PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62028866-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 373aa MW: 39940.6 Da PI: 4.9429

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62028866-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.3e-11	177	222	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq AUR62028866-RA 177 HSIAERLRRERIAERMKGLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 222 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MQHSECEVNL DDLQQQQNGE SQSQQQYQES QNDDFLDQML STIPNCSWPP TPHHDLPSPS 60 SNNHNPNNSN SNLSLKPGDT HSPPDDHRYP FDEASPADAA PPGMLPMPLT LGNTDSVDPS 120 SFKSQGGNLS GGQNFGGQGA GMNQAPPASA STGGSSGAGA PQRQRVRARR GQATDPHSIA 180 ERLRRERIAE RMKGLQELVP NANKTDKASM LDEIIDYVKF LQLQVKVLSM SRLGGAAAVA 240 PLVAASEGGV GVGVGRSSNA NQPTSTNDSM TITEHQVAKL MEEDMGSAMQ YLQGKGLILV 300 GDRSNHLTGQ AGGLEEAFLC LEVTEFACTK LLSIASFPIL HVAMLQQLIL YACFEYHLKT 360 VNDLLTILKV LE*

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MQHSECEVNL DDLQQQQNGE SQSQQQYQES QNDDFLDQML STIPNCSWPP TPHHDLPSPS  60
SNNHNPNNSN SNLSLKPGDT HSPPDDHRYP FDEASPADAA PPGMLPMPLT LGNTDSVDPS  120
SFKSQGGNLS GGQNFGGQGA GMNQAPPASA STGGSSGAGA PQRQRVRARR GQATDPHSIA  180
ERLRRERIAE RMKGLQELVP NANKTDKASM LDEIIDYVKF LQLQVKVLSM SRLGGAAAVA  240
PLVAASEGGV GVGVGRSSNA NQPTSTNDSM TITEHQVAKL MEEDMGSAMQ YLQGKGLILV  300
GDRSNHLTGQ AGGLEEAFLC LEVTEFACTK LLSIASFPIL HVAMLQQLIL YACFEYHLKT  360
VNDLLTILKV LE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	182	187	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	6e-39	bHLH family protein