PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028856-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 212aa    MW: 23676.7 Da    PI: 8.8421
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028856-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.3e-1183130455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++++P +    +k   K+ +L   +eYI+ Lq
  AUR62028856-RA  83 SHSLAERVRRQKISEKMKLLQSIVPGC----DKIAGKIPTLDNIIEYIHTLQ 130
                     79************************9....899****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MKNGGFNSQR SKDFGYEGVE GTRQNTKGRQ RSRRNDKKKD NVLEKKNNTT QNISKKDENK  60
EDASGCKDGC VYVRAKRGQA IDSHSLAERV RRQKISEKMK LLQSIVPGCD KIAGKIPTLD  120
NIIEYIHTLQ DQVKSLMTEI ALVDPTFDVN YLALESIVTH LENSYATTDG SECTRLATQY  180
QSIPLYGSSA QAVSALPSPW LALLEDREYT I*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.32e-34bHLH family protein