PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62028825-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 455aa MW: 49379.3 Da PI: 8.2258

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62028825-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.6	1.4e-29	190	248	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+ +d +++++tYeg+Hnh+ AUR62028825-RA 190 HDGCHWRKYGQKIAKGNPCPRAYYRCTVSpNCPVRKQVQRCPHDMSILITTYEGTHNHP 248 7************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MGEVKEENER LKRLLTKIVK EYQSLEKKIS SMDQSKQSIE TKSSSNNNNE DDDQNQEPEM 60 VSLTLGSWSS NKKHSHDNNN KKQESDDSLN KRRKVEAGGL ELGLDYRKIQ HNSTASATDS 120 IKYSSLENSN KESKEDENVD TWASSHQVDL KAKENTNSNK EVDDQESLHQ PQVKKTRVCI 180 RSRCDSPTIH DGCHWRKYGQ KIAKGNPCPR AYYRCTVSPN CPVRKQVQRC PHDMSILITT 240 YEGTHNHPLP LSATAMASAT SAAASMIKSN SLTSQTPTLT NPSLTTSSLG LHSTNFMTTF 300 HNNPSLISAS CHNSHPTVTL DLTVPNSGFS SFDWLSSSSL YSSSNSARNS SFLNFSSSPA 360 SSSSLPSLDF TTSLPTTAVA TKAIASNPNF QSVLAAAISS YVGNKANNDQ KTASFPSGGS 420 ESGRSLALFP TSLPLSTSKS NNASVGADAR DHIG*

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MGEVKEENER LKRLLTKIVK EYQSLEKKIS SMDQSKQSIE TKSSSNNNNE DDDQNQEPEM  60
VSLTLGSWSS NKKHSHDNNN KKQESDDSLN KRRKVEAGGL ELGLDYRKIQ HNSTASATDS  120
IKYSSLENSN KESKEDENVD TWASSHQVDL KAKENTNSNK EVDDQESLHQ PQVKKTRVCI  180
RSRCDSPTIH DGCHWRKYGQ KIAKGNPCPR AYYRCTVSPN CPVRKQVQRC PHDMSILITT  240
YEGTHNHPLP LSATAMASAT SAAASMIKSN SLTSQTPTLT NPSLTTSSLG LHSTNFMTTF  300
HNNPSLISAS CHNSHPTVTL DLTVPNSGFS SFDWLSSSSL YSSSNSARNS SFLNFSSSPA  360
SSSSLPSLDF TTSLPTTAVA TKAIASNPNF QSVLAAAISS YVGNKANNDQ KTASFPSGGS  420
ESGRSLALFP TSLPLSTSKS NNASVGADAR DHIG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	7e-49	WRKY family protein