PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028070-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 72aa    MW: 8374.37 Da    PI: 8.9399
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028070-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.91.5e-10652448
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48
                     WT++  + +  a +++ ++   +W+ Ia+++  g++  ++k r+q +l
   AUR62028070-RA  6 WTPQQNKAFESALNKYDKDtpdRWNNIAKEVS-GKSVDDVKKRYQELL 52
                     ********************************.************886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MSSKGWTPQQ NKAFESALNK YDKDTPDRWN NIAKEVSGKS VDDVKKRYQE LLEDIQHIES  60
GRVPFPYNWK M*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-25MYB_related family protein