PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027481-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 334aa    MW: 36342.9 Da    PI: 8.2916
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027481-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH413.5e-13160203755
                     HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       Er+RR++++++++ Lr ++P+ +      K++Ka++ + A++YIk+Lq
  AUR62027481-RA 160 VSERNRRKQLKDRIHGLRAIVPNiS------KMDKASTIKDAIDYIKELQ 203
                     57*********************66......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MTEIQLLDNP GQGGEILPIV NSTSSGGLGL VPGGLPPPSH PLVACSASAA CLLDAFLLRL  60
RGHCSSPLRN RFDAIANSLL MLPLRSSAHA SSPPVLALLL ALLLRLLASI SVCRLASWEF  120
GNVLGPITLC YNDDNNNLSS SSPDGCAYSK TYMAESKNVV SERNRRKQLK DRIHGLRAIV  180
PNISKMDKAS TIKDAIDYIK ELQEEERRIK EDIAKLELRK QNNNNESSSW CSTIVLEQEL  240
STLLTNKSNN DHDKRCYDSN NSGCRSFLVE DLKVGVSYAG GRTIIVSLSC SNRNGIMVKL  300
CELFECLKLK VITANITVVG GRILKTIYVE VSL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.29e-36bHLH family protein