PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027222-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 278aa    MW: 31789.9 Da    PI: 6.7872
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027222-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.83.5e-1715103196
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv++p+d +  ++l +  +f  +h ++  + k  +++  ++++W+v l  +  +++++++kGW+eFv++n+Lk+g+f+vF++ g+s+f   vk
  AUR62027222-RA  15 FFKVFLPEDCS--NQLHICSDFK-THLQSAVKRKATIFRPGTNQEWKVGL--EEEDEEFYFRKGWEEFVRENDLKVGEFMVFTHLGNSNF--SVK 102
                     89999776665..569*****96.6633445666889999**********..*********************************99999..665 PP

                     E CS
              B3  96 v 96 
                     +
  AUR62027222-RA 103 L 103
                     5 PP
2B347.92.4e-15170267599
                     -..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE...EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   5 ltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkl.iyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                      ++ ++l+++++ +p + +++h  g      + ++l+ +s  ++Wevk+ iyr +sg+ + l++G + F ++n ++ gD++vF+l+++   +l+v
  AUR62027222-RA 170 KISTSYLNNNLVNIPVHWVNAHmeGA--DDVRRIKLQGSSPrKTWEVKMtIYRPSSGSnCKLSEGLRAFFQDNYIQLGDICVFELVKNVPDTLKV 262
                     34567788889***********6533..344568888855559******6669999999*****************************8888*** PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     ++fr 
  AUR62027222-RA 263 TIFRV 267
                     ***96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MASSSTHFDD ECPKFFKVFL PEDCSNQLHI CSDFKTHLQS AVKRKATIFR PGTNQEWKVG  60
LEEEDEEFYF RKGWEEFVRE NDLKVGEFMV FTHLGNSNFS VKLYGTHGCL KETVQEGEAP  120
AEVELVNKRG KRTRRPGAGR RPSYDPDEEL VRVAEAYRSA HSDIPSFMVK ISTSYLNNNL  180
VNIPVHWVNA HMEGADDVRR IKLQGSSPRK TWEVKMTIYR PSSGSNCKLS EGLRAFFQDN  240
YIQLGDICVF ELVKNVPDTL KVTIFRVNDV LVFPDHS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.11e-16B3 family protein