PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62027221-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 338aa MW: 39495.9 Da PI: 10.6275

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62027221-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.1	6.6e-18	46	136	5	98
-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ps v k+ +l +pk+fa+++ ++k + s t ++ +++W v + + ++ ++kGWk+F+ n+Lk+gD+++F+l+++++f v+++r AUR62027221-RA 46 IQPSFVVKNFNLGIPKEFANRYlDKKRPFSLTFNVQIDASKTWPVLV--DADYTHVKFRKGWKDFALKNKLKVGDICIFELIRKHKF--QVHIIR 136 5678899*************766666777777777888***..*******************************98888..888887 PP
2	B3	50.6	3.5e-16	224	321	1	98
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+ ++ ps v + + +pk+f +++ ++k+ s l++ sg++W v++ + + l++GWk+F+ +n+L++ D+++F+l++++ef AUR62027221-RA 224 FVIKMQPSFVEYNFSVGVPKTFRKRYftylDKKQYFSHRFNLRTDSGKTWPVTM--FASNTHAKLKTGWKSFALDNKLNVDDTCIFELINQQEF- 315 677888999999999***********99777789999***********..66666788**********************987777. PP .EEEEE- CS B3 92 lvvkvfr 98 +v+++r AUR62027221-RA 316 -KVSILR 321 .888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MLVKAMRTNG GAKLIIARNT SLTSEEDKKV RAYAYQRKQP LFVIRIQPSF VVKNFNLGIP 60 KEFANRYLDK KRPFSLTFNV QIDASKTWPV LVDADYTHVK FRKGWKDFAL KNKLKVGDIC 120 IFELIRKHKF QVHIIRVSDE KNAENLVFKT EEEIHYPLIT KACRESPPKK RRTNDHTKPC 180 SSVKGMQTSM DNKLIIAHKR NWKLTPEEYK RVRAYAHQCK HPVFVIKMQP SFVEYNFSVG 240 VPKTFRKRYF TYLDKKQYFS HRFNLRTDSG KTWPVTMFAS NTHAKLKTGW KSFALDNKLN 300 VDDTCIFELI NQQEFKVSIL RVANAKGNHE NPVKSEV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	4e-15	B3 family protein