PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027182-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ZF-HD
Protein Properties Length: 271aa    MW: 28847.6 Da    PI: 8.8557
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027182-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer98.54.8e-311571259
     ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                    ++vrY+eClkNhA+ +GghavDGCgEf+p+ g+eg+++a++CaAC CHRnFHR+e ++
  AUR62027182-RA 15 ATVRYRECLKNHAIGIGGHAVDGCGEFLPA-GAEGSIDAFRCAACSCHRNFHRKEYSN 71
                    589**************************9.999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MAITPTFKKQ HQPTATVRYR ECLKNHAIGI GGHAVDGCGE FLPAGAEGSI DAFRCAACSC  60
HRNFHRKEYS NSIVPPQLAI RNSGGYLHVS SGQRPLALPS PTSGGTXXXX XXXEETGGGG  120
DQVMGSGGGN GNVTTRVGGG GTMDISGGST MLSGGSNTSS GKKRFRTKFT PEQKDKMLGL  180
AEQLGWRIQK QDEELVHQFC NQTGIKRHVL KVWMHNNKLT LADIGLVYGN DKECLVTGYS  240
DSDYAADVDT RRSVTGYVFT LGGSVVTRTS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-27ZF-HD family protein