PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026941-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 308aa    MW: 33180.8 Da    PI: 7.5031
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026941-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.00017173195123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  Fs+   L  H+r+H
  AUR62026941-RA 173 HECGICGAEFSSGQALGGHMRRH 195
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MVAHQQEAIV GDNNDVVVGE KDNTMFNKHT NNMMMMIKGK RTKRPMPLSP LALTMSSATT  60
TDEGGANSAT SEEWAAPVSA PSSEEEEDMA HSLGGHRASH KKPKTSNVVA LSELKKSSSV  120
IFSLINEDNH HHHGLKQYDH HFNDDGTTLS LQIANSSLCT SSTSNNTNKA KVHECGICGA  180
EFSSGQALGG HMRRHRPIGT TTTTTIPSPS RSVTLANSIA SNNNVKDEKM TRNLFTCFTL  240
HDVPPWYEEL WGRRAKDGAK NSTSQSVPAT APAHADNITT PFVPQSNAGT SSGSFLDSLQ  300
PKQNKLF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.18e-17C2H2 family protein