PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026930-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 282aa    MW: 32453.3 Da    PI: 5.6808
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026930-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.91.7e-16855148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W +eEde+l+  v+ lG ++W+t+a+  g+ R++k+c++rw++yl
   AUR62026930-RA  8 KGPWYEEEDERLKTFVTVLGARRWDTVAKISGLSRSGKSCRLRWLNYL 55
                     79********************************************97 PP
2Myb_DNA-binding53.36.5e-1762106248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g+ T++E++l++++++++G++ W++Iar+++ gRt++++k++w+++l
   AUR62026930-RA  62 GSITPQEELLILQLHERWGNK-WAKIARRLP-GRTDNEVKNYWRTHL 106
                      567******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGEENLRKGP WYEEEDERLK TFVTVLGARR WDTVAKISGL SRSGKSCRLR WLNYLRPCLK  60
HGSITPQEEL LILQLHERWG NKWAKIARRL PGRTDNEVKN YWRTHLRKKM KMQISILNHS  120
ISSPTCNVSS SIETSSSEET NNYSNQLDVL IQEGNMITPQ ISSNNPNTKS TDENIEAVTS  180
HYYVDCNDKL KGLTDCMNTN SSYANRLSDF MIASSPYENR VSDWLNTVLR DVDQTDKYNP  240
GCCEISYGLP DLSLHYPTTW CIEDASAWDF LDTTWDMDLF N*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53200.16e-55MYB family protein