PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026798-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 546aa    MW: 61361.6 Da    PI: 4.7613
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026798-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS428.84.2e-1311755442373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++cA+++s+g++++a++++++l++++s +g+p qR+aay++e+Laarla+s++ lykal+++e +   s e+laa+++++ev+P++kf+++
  AUR62026798-RA 175 KQLLFDCATMISEGNFAQAESMINELRQMVSIQGEPSQRIAAYMVEGLAARLASSGKVLYKALRCKEPP---SFEKLAAMQVLFEVCPCFKFGFM 266
                     689*****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN+aIlea++ e++vHiiDfdi+qG Q+++L+++La++++++ +lR+Tgv++pes+      l+++g+rL+ +Ae  g+pfef++ + +r+  +
  AUR62026798-RA 267 AANEAILEAIKYEKKVHIIDFDINQGNQYINLIRSLAKQRGKSIKLRLTGVDDPESVqrPIGGLKNIGQRLEVLAELEGLPFEFKA-LPTRTPLV 360
                     *******************************************************99888899***********************.599***** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++e+L+++pgEal+Vn+++ lh+++desvs+ + rd++L++vksl+Pk+v++veq++++n+++Fl rf+ea +yysa+f+sl+a+lpres+eri+
  AUR62026798-RA 361 TPEMLDCRPGEALVVNFAFLLHHMPDESVSTINLRDQLLRMVKSLNPKLVTIVEQDVNTNTTPFLSRFSEAYSYYSAVFESLDATLPRESQERIN 455
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     vE+++l+r+ivn++aceg+er+er e ++kWr+r+++aGF++ pl+++a + ++ l+   + + y+++e  g+l +gW+d++Lv++SaW
  AUR62026798-RA 456 VEKQCLARDIVNIIACEGEERIERYEVAGKWRARMQMAGFRSCPLRQNASDMIRELIVSQYCNRYKLNEVMGALHFGWEDKNLVVASAW 544
                     *********************************************************9999777************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    
MSTAYGTPRL YALQGGSNSS GLSTQLYGSE KHKVKYMAET FNSPSYDVQF FNNSPSEELI  60
HPPSSTPIQF DSSYQTNYDL DYFISQSPEA VEYDEGMMKL KLQELEHALL DNDEDGVDEV  120
VIGPEHNMEI DEDWAGSLRN MMAHDSPKES TSSESSNLSS IGSKDEALPS SRNTKQLLFD  180
CATMISEGNF AQAESMINEL RQMVSIQGEP SQRIAAYMVE GLAARLASSG KVLYKALRCK  240
EPPSFEKLAA MQVLFEVCPC FKFGFMAANE AILEAIKYEK KVHIIDFDIN QGNQYINLIR  300
SLAKQRGKSI KLRLTGVDDP ESVQRPIGGL KNIGQRLEVL AELEGLPFEF KALPTRTPLV  360
TPEMLDCRPG EALVVNFAFL LHHMPDESVS TINLRDQLLR MVKSLNPKLV TIVEQDVNTN  420
TTPFLSRFSE AYSYYSAVFE SLDATLPRES QERINVEKQC LARDIVNIIA CEGEERIERY  480
EVAGKWRARM QMAGFRSCPL RQNASDMIRE LIVSQYCNRY KLNEVMGALH FGWEDKNLVV  540
ASAWN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein