PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62026763-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 275aa MW: 30305.2 Da PI: 4.3746

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62026763-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.7	9.5e-37	34	90	6	62
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +cprC s+ntkfCyynnyslsqPr+fCk+CrryWt+GG+lrnvPvGgg+rk+++s+ AUR62026763-RA 34 PNCPRCASSNTKFCYYNNYSLSQPRFFCKGCRRYWTRGGSLRNVPVGGGCRKSRRSR 90 58***************************************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MMSIPNDHLF QTLPPRPLPM TSDSRWRVSI NPAPNCPRCA SSNTKFCYYN NYSLSQPRFF 60 CKGCRRYWTR GGSLRNVPVG GGCRKSRRSR STKGFSSGLT GLRSDNNPSS NSSSSCSESG 120 CPDIDMAAVF AKFLNPGQEN VNEEMNEATT NTSSEASYGS PISSSCGLEN GLEYQKLSDD 180 FLDLVPSDHR QLQVDEVNQG FINPDLASFD DIIEDVFWSE DSDFSGFTWQ PIAQMQEFDS 240 SLPPAHESQT SADLFSSDNW SYFDTAGLEA FSAP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21340.1	2e-30	Dof family protein