PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62026577-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | FAR1 | ||||||||
Protein Properties | Length: 139aa MW: 16702.1 Da PI: 8.7043 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 52.2 | 2e-16 | 33 | 124 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90 +Yn+YAk+ G+ vrk++s ++ +g++++r+f+C + gk+ + + +k +r++++ r++ ka++ + +++ +++w+vtk+++e nHel AUR62026577-RA 33 YYNNYAKRHGYVVRKDRSDTK--HGRVVRRDFYCRRGGKKPLKVVDMSKPQRQKESCRCDFKAHMCIVLKRcfdifSEEWHVTKFVKERNHELL 124 8***************99887..899********************99999999999********998877778889***************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MLHFNLNVLA IEEDENEPFI GQTFESQEEA YMYYNNYAKR HGYVVRKDRS DTKHGRVVRR 60 DFYCRRGGKK PLKVVDMSKP QRQKESCRCD FKAHMCIVLK RCFDIFSEEW HVTKFVKERN 120 HELLSYDEMH LLAANRLY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10240.1 | 5e-25 | FAR1 family protein |