PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026533-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 203aa    MW: 22602 Da    PI: 9.8704
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026533-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-13121165347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  + G+g+W+ I+r + k+Rt+ q+ s+ qky
   AUR62026533-RA 121 PWTEEEHRLFLLGLDKVGKGDWRGISRNFVKTRTPTQVASHAQKY 165
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MTAPPSKSPR TCSQCGHNGH NARTCSEHSV VPPSHTTGFR LFGVTFNAVD SSLSPSPPFS  60
PSSSSSSGFR KSFSMNNLCQ YEQQHQDQQQ QHIDSSSQDV VSSGYNSDDA LHASASRTRI  120
PWTEEEHRLF LLGLDKVGKG DWRGISRNFV KTRTPTQVAS HAQKYFLRRT NLNRRRRRSS  180
LFDITTDTVG YHILDLCVFG PK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.24e-38MYB_related family protein