PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62025920-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 277aa    MW: 31637.9 Da    PI: 9.9208
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62025920-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.11.4e-082268147
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                    +fY++YA+ +G  vr  ++k+ + ++e++ + ++C+k+g++++ ++k
  AUR62025920-RA 22 EFYKQYARFCGLVVRLGTEKRIQATDEVYLKYLYCNKQGFTNDGETK 68
                    6****************************************998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MLPPELKPTI GMPFDSLLKG VEFYKQYARF CGLVVRLGTE KRIQATDEVY LKYLYCNKQG  60
FTNDGETKGR VAKKEVVLPS KKKKGLSNIE LMFESVGILC RHILFVIKGK FLFEIPRQYV  120
LHRWNKEAMK KPIFGLNNNL LDGAQKDKKQ KLVGDLWYRF FSCVSLCEEK VECLESLLSK  180
LISFENEMKD LESEGPVDKR EAKNKHIELF VGSNDIVVDI LPPKKSSNKG SGSEKRKKSD  240
KEIAIGESQK KDRLCRTCGQ RANHDSRNCP QKKNPN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
181110KKKKGLSNIELMFESVGILCRHILFVIKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.15e-07FAR1 family protein